Convert AnnData to Seurat

Upload an AnnData .h5ad object and download a converted Seurat .rds file. Use it with R-based tools like Seurat, Monocle, and CellChat. Works with files from CELLxGENE, Scanpy, squidpy, and scvi-tools. Spatial transcriptomics data is automatically preserved. No R or Python installation required.

• Expression matrices (.X and .layers → assay slots)
• Cell metadata (.obs → @meta.data)
• Gene metadata (.var → @meta.features)
• Embeddings (.obsm → @reductions)
• Graphs (.obsp → @graphs)
• Unstructured metadata (.uns → @misc)
• Spatial coordinates (.obsm['spatial'] → @images)
• Tissue images and scale factors (.uns['spatial'] → @images)